Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.07■□□□□ 0.96
Ebf3O08791 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ebf3O08791 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.07■□□□□ 0.96
Ebf3O08791 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ebf3O08791 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.07■□□□□ 0.96
Ebf3O08791 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
Ebf3O08791 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ebf3O08791 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ebf3O08791 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ebf3O08791 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.06■□□□□ 0.96
Ebf3O08791 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ebf3O08791 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Ebf3O08791 Gm8493-201ENSMUST00000196881 489 ntBASIC21.06■□□□□ 0.96
Ebf3O08791 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.06■□□□□ 0.96
Ebf3O08791 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ebf3O08791 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ebf3O08791 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ebf3O08791 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ebf3O08791 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Ebf3O08791 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ebf3O08791 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ebf3O08791 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.05■□□□□ 0.96
Ebf3O08791 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ebf3O08791 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ebf3O08791 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ebf3O08791 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ebf3O08791 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Ebf3O08791 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ebf3O08791 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ebf3O08791 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.04■□□□□ 0.96
Ebf3O08791 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Ebf3O08791 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.03■□□□□ 0.96
Ebf3O08791 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.03■□□□□ 0.96
Ebf3O08791 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.03■□□□□ 0.96
Ebf3O08791 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ebf3O08791 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ebf3O08791 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
Ebf3O08791 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ebf3O08791 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.01■□□□□ 0.95
Ebf3O08791 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ebf3O08791 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ebf3O08791 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ebf3O08791 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ebf3O08791 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ebf3O08791 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ebf3O08791 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ebf3O08791 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ebf3O08791 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ebf3O08791 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ebf3O08791 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ebf3O08791 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ebf3O08791 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.99■□□□□ 0.95
Ebf3O08791 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.99■□□□□ 0.95
Ebf3O08791 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ebf3O08791 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.99■□□□□ 0.95
Ebf3O08791 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Ebf3O08791 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.99■□□□□ 0.95
Ebf3O08791 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ebf3O08791 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ebf3O08791 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ebf3O08791 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ebf3O08791 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ebf3O08791 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ebf3O08791 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ebf3O08791 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.98■□□□□ 0.95
Ebf3O08791 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ebf3O08791 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ebf3O08791 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ebf3O08791 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ebf3O08791 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ebf3O08791 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.97■□□□□ 0.95
Ebf3O08791 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.97■□□□□ 0.95
Ebf3O08791 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ebf3O08791 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ebf3O08791 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ebf3O08791 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ebf3O08791 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.96■□□□□ 0.95
Ebf3O08791 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ebf3O08791 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms