Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Etf1-202ENSMUST00000180351 108 ntBASIC18.01■□□□□ 0.47
Raet1bO08603 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.01■□□□□ 0.47
Raet1bO08603 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Raet1bO08603 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Raet1bO08603 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.01■□□□□ 0.47
Raet1bO08603 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Raet1bO08603 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Raet1bO08603 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Raet1bO08603 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18■□□□□ 0.47
Raet1bO08603 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18■□□□□ 0.47
Raet1bO08603 Gm9959-201ENSMUST00000068277 390 ntBASIC18■□□□□ 0.47
Raet1bO08603 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1bO08603 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1bO08603 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1bO08603 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Raet1bO08603 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1bO08603 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1bO08603 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1bO08603 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.99■□□□□ 0.47
Raet1bO08603 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.99■□□□□ 0.47
Raet1bO08603 Gm7143-201ENSMUST00000222811 859 ntBASIC17.99■□□□□ 0.47
Raet1bO08603 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1bO08603 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1bO08603 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Raet1bO08603 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1bO08603 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1bO08603 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.98■□□□□ 0.47
Raet1bO08603 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1bO08603 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1bO08603 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Raet1bO08603 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Raet1bO08603 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Raet1bO08603 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Raet1bO08603 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1bO08603 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Raet1bO08603 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1bO08603 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.96■□□□□ 0.47
Raet1bO08603 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Raet1bO08603 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.95■□□□□ 0.46
Raet1bO08603 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.95■□□□□ 0.46
Raet1bO08603 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Raet1bO08603 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1bO08603 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.94■□□□□ 0.46
Raet1bO08603 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1bO08603 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1bO08603 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1bO08603 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.93■□□□□ 0.46
Raet1bO08603 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1bO08603 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.93■□□□□ 0.46
Raet1bO08603 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.93■□□□□ 0.46
Raet1bO08603 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1bO08603 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Raet1bO08603 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms