Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm21788J3QNH3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21788J3QNH3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21788J3QNH3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.14■□□□□ 0.33
Gm21788J3QNH3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21788J3QNH3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21788J3QNH3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm21788J3QNH3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.12■□□□□ 0.33
Gm21788J3QNH3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21788J3QNH3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21788J3QNH3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.1■□□□□ 0.33
Gm21788J3QNH3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm21788J3QNH3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21788J3QNH3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21788J3QNH3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21788J3QNH3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms