Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm21818J3KMS6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm21818J3KMS6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm21818J3KMS6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm21818J3KMS6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm21818J3KMS6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm21818J3KMS6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.27■□□□□ 0.35
Gm21818J3KMS6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm21818J3KMS6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm21818J3KMS6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21818J3KMS6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm21818J3KMS6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21818J3KMS6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms