Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc149F6V035 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc149F6V035 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc149F6V035 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Spcs1-204ENSMUST00000226782 949 ntBASIC20.67■□□□□ 0.9
Ccdc149F6V035 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc149F6V035 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc149F6V035 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Gm12251-201ENSMUST00000117893 792 ntBASIC20.66■□□□□ 0.9
Ccdc149F6V035 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Gm18284-201ENSMUST00000172604 624 ntBASIC20.66■□□□□ 0.9
Ccdc149F6V035 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.66■□□□□ 0.9
Ccdc149F6V035 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc149F6V035 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Gm8495-201ENSMUST00000188740 694 ntBASIC20.65■□□□□ 0.9
Ccdc149F6V035 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc149F6V035 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc149F6V035 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc149F6V035 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.64■□□□□ 0.89
Ccdc149F6V035 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc149F6V035 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.64■□□□□ 0.89
Ccdc149F6V035 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc149F6V035 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc149F6V035 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc149F6V035 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc149F6V035 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc149F6V035 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc149F6V035 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc149F6V035 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc149F6V035 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc149F6V035 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc149F6V035 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc149F6V035 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.6■□□□□ 0.89
Ccdc149F6V035 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc149F6V035 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc149F6V035 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms