Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5878E9PUB3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Gm13238-201ENSMUST00000117655 780 ntBASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5878E9PUB3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5878E9PUB3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5878E9PUB3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.27■□□□□ 0.04
Gm5878E9PUB3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5878E9PUB3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5878E9PUB3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm5878E9PUB3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Gm10232-201ENSMUST00000089221 720 ntBASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm5878E9PUB3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Gm7143-201ENSMUST00000222811 859 ntBASIC15.24■□□□□ 0.03
Gm5878E9PUB3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5878E9PUB3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.23■□□□□ 0.03
Gm5878E9PUB3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5878E9PUB3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms