Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BC035044E0CXF8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BC035044E0CXF8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BC035044E0CXF8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BC035044E0CXF8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.33■□□□□ 0.37
BC035044E0CXF8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BC035044E0CXF8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BC035044E0CXF8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BC035044E0CXF8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.31■□□□□ 0.36
BC035044E0CXF8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BC035044E0CXF8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.3■□□□□ 0.36
BC035044E0CXF8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BC035044E0CXF8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.29■□□□□ 0.36
BC035044E0CXF8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BC035044E0CXF8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BC035044E0CXF8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Gm13238-201ENSMUST00000117655 780 ntBASIC17.27■□□□□ 0.36
BC035044E0CXF8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BC035044E0CXF8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BC035044E0CXF8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.27■□□□□ 0.35
BC035044E0CXF8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BC035044E0CXF8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BC035044E0CXF8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BC035044E0CXF8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms