Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Gm15039-201ENSMUST00000118914 875 ntBASIC18.31■□□□□ 0.52
Gm3543D3Z235 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.3■□□□□ 0.52
Gm3543D3Z235 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3543D3Z235 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3543D3Z235 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm3543D3Z235 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3543D3Z235 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3543D3Z235 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.28■□□□□ 0.52
Gm3543D3Z235 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
Gm3543D3Z235 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3543D3Z235 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gm3543D3Z235 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gm3543D3Z235 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3543D3Z235 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gm3543D3Z235 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.27■□□□□ 0.52
Gm3543D3Z235 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3543D3Z235 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3543D3Z235 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3543D3Z235 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Gm3543D3Z235 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3543D3Z235 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Notumos-201ENSMUST00000151998 2659 ntBASIC18.25■□□□□ 0.51
Gm3543D3Z235 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3543D3Z235 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3543D3Z235 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.23■□□□□ 0.51
Gm3543D3Z235 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3543D3Z235 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Gm3543D3Z235 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Gm9870-201ENSMUST00000063874 645 ntBASIC18.22■□□□□ 0.51
Gm3543D3Z235 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3543D3Z235 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.21■□□□□ 0.51
Gm3543D3Z235 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Golgb1-201ENSMUST00000023534 498 ntBASIC18.21■□□□□ 0.51
Gm3543D3Z235 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3543D3Z235 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3543D3Z235 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3543D3Z235 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms