Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.23■□□□□ 0.51
Shank1D3YZU1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.22■□□□□ 0.51
Shank1D3YZU1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.22■□□□□ 0.51
Shank1D3YZU1 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.22■□□□□ 0.51
Shank1D3YZU1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.21■□□□□ 0.51
Shank1D3YZU1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Gm12933-201ENSMUST00000120203 872 ntBASIC18.21■□□□□ 0.51
Shank1D3YZU1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank1D3YZU1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.21■□□□□ 0.5
Shank1D3YZU1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.2■□□□□ 0.5
Shank1D3YZU1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.2■□□□□ 0.5
Shank1D3YZU1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Shank1D3YZU1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shank1D3YZU1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shank1D3YZU1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.19■□□□□ 0.5
Shank1D3YZU1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.18■□□□□ 0.5
Shank1D3YZU1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank1D3YZU1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank1D3YZU1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.17■□□□□ 0.5
Shank1D3YZU1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.17■□□□□ 0.5
Shank1D3YZU1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank1D3YZU1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.15■□□□□ 0.5
Shank1D3YZU1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank1D3YZU1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shank1D3YZU1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Shank1D3YZU1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank1D3YZU1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shank1D3YZU1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms