Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clip3B9EHT4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clip3B9EHT4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clip3B9EHT4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Clip3B9EHT4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.51■□□□□ 0.71
Clip3B9EHT4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.51■□□□□ 0.71
Clip3B9EHT4 Golgb1-201ENSMUST00000023534 498 ntBASIC19.51■□□□□ 0.71
Clip3B9EHT4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Gm9870-201ENSMUST00000063874 645 ntBASIC19.51■□□□□ 0.71
Clip3B9EHT4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip3B9EHT4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip3B9EHT4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.49■□□□□ 0.71
Clip3B9EHT4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.48■□□□□ 0.71
Clip3B9EHT4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip3B9EHT4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip3B9EHT4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.48■□□□□ 0.71
Clip3B9EHT4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip3B9EHT4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Clip3B9EHT4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip3B9EHT4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip3B9EHT4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.47■□□□□ 0.71
Clip3B9EHT4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip3B9EHT4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.47■□□□□ 0.71
Clip3B9EHT4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip3B9EHT4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Clip3B9EHT4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clip3B9EHT4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clip3B9EHT4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip3B9EHT4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.45■□□□□ 0.7
Clip3B9EHT4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.44■□□□□ 0.7
Clip3B9EHT4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.44■□□□□ 0.7
Clip3B9EHT4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip3B9EHT4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip3B9EHT4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip3B9EHT4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms