Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcna-ps2A0A140T8V5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcna-ps2A0A140T8V5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcna-ps2A0A140T8V5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcna-ps2A0A140T8V5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcna-ps2A0A140T8V5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcna-ps2A0A140T8V5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcna-ps2A0A140T8V5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcna-ps2A0A140T8V5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcna-ps2A0A140T8V5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Etf1-202ENSMUST00000180351 108 ntBASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Gm40881-201ENSMUST00000223397 166 ntBASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcna-ps2A0A140T8V5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcna-ps2A0A140T8V5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcna-ps2A0A140T8V5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcna-ps2A0A140T8V5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcna-ps2A0A140T8V5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcna-ps2A0A140T8V5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms