Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc194A0A140LIT1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc194A0A140LIT1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc194A0A140LIT1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc194A0A140LIT1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc194A0A140LIT1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc194A0A140LIT1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc194A0A140LIT1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc194A0A140LIT1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc194A0A140LIT1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc194A0A140LIT1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc194A0A140LIT1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc194A0A140LIT1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.1■□□□□ 0.81
Ccdc194A0A140LIT1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc194A0A140LIT1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc194A0A140LIT1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc194A0A140LIT1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc194A0A140LIT1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms