Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.53■■□□□ 1.2
Lcmt1A0A0U1RNF2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Lcmt1A0A0U1RNF2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
Lcmt1A0A0U1RNF2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lcmt1A0A0U1RNF2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lcmt1A0A0U1RNF2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Lcmt1A0A0U1RNF2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lcmt1A0A0U1RNF2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lcmt1A0A0U1RNF2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.51■■□□□ 1.19
Lcmt1A0A0U1RNF2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.51■■□□□ 1.19
Lcmt1A0A0U1RNF2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lcmt1A0A0U1RNF2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Lcmt1A0A0U1RNF2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Gm7417-201ENSMUST00000192950 473 ntBASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lcmt1A0A0U1RNF2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lcmt1A0A0U1RNF2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lcmt1A0A0U1RNF2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lcmt1A0A0U1RNF2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lcmt1A0A0U1RNF2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Lcmt1A0A0U1RNF2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 Etf1-202ENSMUST00000180351 108 ntBASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lcmt1A0A0U1RNF2 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lcmt1A0A0U1RNF2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lcmt1A0A0U1RNF2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms