Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-1A0A0G2JEV5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav7-1A0A0G2JEV5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Golph3-202ENSMUST00000226517 2359 ntBASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav7-1A0A0G2JEV5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Mir6538-201ENSMUST00000183713 110 ntBASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-1A0A0G2JEV5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-1A0A0G2JEV5 Iqck-206ENSMUST00000208658 2891 ntBASIC15.58■□□□□ 0.09
Trav7-1A0A0G2JEV5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-1A0A0G2JEV5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-1A0A0G2JEV5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav7-1A0A0G2JEV5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms