Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9-4A0A0B4J1K2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Trav9-4A0A0B4J1K2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gm7143-201ENSMUST00000222811 859 ntBASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.21■□□□□ 0.03
Trav9-4A0A0B4J1K2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9-4A0A0B4J1K2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gm9870-201ENSMUST00000063874 645 ntBASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9-4A0A0B4J1K2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9-4A0A0B4J1K2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9-4A0A0B4J1K2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9-4A0A0B4J1K2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms