Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv20A0A0B4J1H5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv20A0A0B4J1H5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trbv20A0A0B4J1H5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv20A0A0B4J1H5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv20A0A0B4J1H5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv20A0A0B4J1H5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv20A0A0B4J1H5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv20A0A0B4J1H5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv20A0A0B4J1H5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv20A0A0B4J1H5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv20A0A0B4J1H5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.19■□□□□ 0.5
Trbv20A0A0B4J1H5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv20A0A0B4J1H5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv20A0A0B4J1H5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv20A0A0B4J1H5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv20A0A0B4J1H5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trbv20A0A0B4J1H5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv20A0A0B4J1H5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv20A0A0B4J1H5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv20A0A0B4J1H5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv20A0A0B4J1H5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv20A0A0B4J1H5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv20A0A0B4J1H5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv20A0A0B4J1H5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv20A0A0B4J1H5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Gm6311-201ENSMUST00000073790 878 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms