Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Gm10232-201ENSMUST00000089221 720 ntBASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv19A0A0B4J1H4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Notumos-201ENSMUST00000151998 2659 ntBASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trbv19A0A0B4J1H4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv19A0A0B4J1H4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv19A0A0B4J1H4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv19A0A0B4J1H4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv19A0A0B4J1H4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv19A0A0B4J1H4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv19A0A0B4J1H4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv19A0A0B4J1H4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv19A0A0B4J1H4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv19A0A0B4J1H4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv19A0A0B4J1H4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv19A0A0B4J1H4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv19A0A0B4J1H4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms