Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv16A0A0B4J1H3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv16A0A0B4J1H3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv16A0A0B4J1H3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv16A0A0B4J1H3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv16A0A0B4J1H3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv16A0A0B4J1H3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv16A0A0B4J1H3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbv16A0A0B4J1H3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv16A0A0B4J1H3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv16A0A0B4J1H3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms