Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Trbv2A0A0B4J1G8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv2A0A0B4J1G8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv2A0A0B4J1G8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv2A0A0B4J1G8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv2A0A0B4J1G8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv2A0A0B4J1G8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.06■□□□□ 0.48
Trbv2A0A0B4J1G8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv2A0A0B4J1G8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv2A0A0B4J1G8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv2A0A0B4J1G8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.05■□□□□ 0.48
Trbv2A0A0B4J1G8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv2A0A0B4J1G8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.04■□□□□ 0.48
Trbv2A0A0B4J1G8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv2A0A0B4J1G8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trbv2A0A0B4J1G8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv2A0A0B4J1G8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv2A0A0B4J1G8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv2A0A0B4J1G8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv2A0A0B4J1G8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv2A0A0B4J1G8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18■□□□□ 0.47
Trbv2A0A0B4J1G8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv2A0A0B4J1G8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trbv2A0A0B4J1G8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms