Protein–RNA interactions for Protein: A0A0A6YYE7

Igkv4-57, Immunoglobulin kappa variable 4-57 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-57A0A0A6YYE7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Gm43530-201ENSMUST00000195920 274 ntBASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv4-57A0A0A6YYE7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gm13241-201ENSMUST00000094493 780 ntBASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gm21956-201ENSMUST00000179946 522 ntBASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-57A0A0A6YYE7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-57A0A0A6YYE7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms