Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-5A0A075B6B5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-5A0A075B6B5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-5A0A075B6B5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-5A0A075B6B5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-5A0A075B6B5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-5A0A075B6B5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-5A0A075B6B5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-5A0A075B6B5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Gm8503-201ENSMUST00000118131 455 ntBASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-5A0A075B6B5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-5A0A075B6B5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-5A0A075B6B5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms