Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Gm43403-201ENSMUST00000198011 1786 ntBASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3-4A0A075B654 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Rarb-207ENSMUST00000225921 2756 ntBASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-4A0A075B654 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-4A0A075B654 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-4A0A075B654 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trav3-4A0A075B654 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-4A0A075B654 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms