Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-4-dv10A0A075B651 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-4-dv10A0A075B651 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-4-dv10A0A075B651 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav4-4-dv10A0A075B651 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-4-dv10A0A075B651 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav4-4-dv10A0A075B651 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-4-dv10A0A075B651 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav4-4-dv10A0A075B651 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gm10420-201ENSMUST00000121713 882 ntBASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-4-dv10A0A075B651 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-4-dv10A0A075B651 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav4-4-dv10A0A075B651 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav4-4-dv10A0A075B651 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-4-dv10A0A075B651 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-4-dv10A0A075B651 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-4-dv10A0A075B651 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms