Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.63■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gm7332-201ENSMUST00000118351 454 ntBASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.58■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.58■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms