Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Gm21956-201ENSMUST00000179946 522 ntBASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav13-1A0A075B644 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-1A0A075B644 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Gm9870-201ENSMUST00000063874 645 ntBASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13-1A0A075B644 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-1A0A075B644 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13-1A0A075B644 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
Trav13-1A0A075B644 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav13-1A0A075B644 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav13-1A0A075B644 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-1A0A075B644 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Gm12821-201ENSMUST00000120022 600 ntBASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-1A0A075B644 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13-1A0A075B644 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms