Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav8-1A0A075B641 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav8-1A0A075B641 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8-1A0A075B641 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8-1A0A075B641 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8-1A0A075B641 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8-1A0A075B641 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8-1A0A075B641 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms