Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-7-dv9A0A075B639 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.02■□□□□ 0.48
Trav6-7-dv9A0A075B639 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-7-dv9A0A075B639 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-7-dv9A0A075B639 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-7-dv9A0A075B639 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav6-7-dv9A0A075B639 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-7-dv9A0A075B639 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-7-dv9A0A075B639 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gm7143-201ENSMUST00000222811 859 ntBASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav6-7-dv9A0A075B639 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-7-dv9A0A075B639 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6-7-dv9A0A075B639 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6-7-dv9A0A075B639 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6-7-dv9A0A075B639 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm15820-201ENSMUST00000201566 728 ntBASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm5812-201ENSMUST00000061073 957 ntBASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-7-dv9A0A075B639 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms