Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16nA0A075B634 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Golph3-202ENSMUST00000226517 2359 ntBASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav16nA0A075B634 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16nA0A075B634 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav16nA0A075B634 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16nA0A075B634 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav16nA0A075B634 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav16nA0A075B634 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16nA0A075B634 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16nA0A075B634 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms