Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8n-2A0A075B633 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Gm18671-201ENSMUST00000214826 683 ntBASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav8n-2A0A075B633 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav8n-2A0A075B633 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav8n-2A0A075B633 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Gm10849-201ENSMUST00000100397 618 ntBASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8n-2A0A075B633 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8n-2A0A075B633 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav8n-2A0A075B633 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8n-2A0A075B633 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Gm11421-201ENSMUST00000122124 294 ntBASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Gm37179-201ENSMUST00000194862 823 ntBASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Gm42778-201ENSMUST00000199644 553 ntBASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav8n-2A0A075B633 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.64■□□□□ 0.58
Trav8n-2A0A075B633 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Trav8n-2A0A075B633 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav8n-2A0A075B633 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav8n-2A0A075B633 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms