Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6-6A0A075B603 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-6A0A075B603 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
Trav6-6A0A075B603 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-6A0A075B603 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Gm11175-201ENSMUST00000116172 543 ntBASIC15.04■□□□□ -0
Trav6-6A0A075B603 Mir6538-201ENSMUST00000183713 110 ntBASIC15.04■□□□□ -0
Trav6-6A0A075B603 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-6A0A075B603 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trav6-6A0A075B603 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-6A0A075B603 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-6A0A075B603 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-6A0A075B603 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-6A0A075B603 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-6A0A075B603 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms