Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-1A0A075B5Z7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-1A0A075B5Z7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-1A0A075B5Z7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav5-1A0A075B5Z7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-1A0A075B5Z7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-1A0A075B5Z7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-1A0A075B5Z7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav5-1A0A075B5Z7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-1A0A075B5Z7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Trav5-1A0A075B5Z7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Gm43137-201ENSMUST00000198052 594 ntBASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-1A0A075B5Z7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav5-1A0A075B5Z7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-1A0A075B5Z7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Gm45417-201ENSMUST00000209533 758 ntBASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-1A0A075B5Z7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
Trav5-1A0A075B5Z7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms