Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-55A0A075B5W6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-55A0A075B5W6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-55A0A075B5W6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-55A0A075B5W6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.02■□□□□ 0.16
Ighv1-55A0A075B5W6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-55A0A075B5W6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-55A0A075B5W6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-55A0A075B5W6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-55A0A075B5W6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-55A0A075B5W6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-55A0A075B5W6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-55A0A075B5W6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms