Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm13996-201ENSMUST00000118456 430 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm7783-201ENSMUST00000204795 781 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm8913-201ENSMUST00000209491 641 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm270-201ENSMUST00000223010 976 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm11509-201ENSMUST00000117358 325 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm14071-201ENSMUST00000117817 509 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm11663-201ENSMUST00000117888 290 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm11783-201ENSMUST00000119549 885 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Gm43179-201ENSMUST00000198797 275 ntBASIC10.25□□□□□ -0.77
H2afb3S4R1G7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H2afb3S4R1G7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms