Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gm3329-201ENSMUST00000159873 556 ntBASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf3Q9Z2L7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm27046-201ENSMUST00000182160 463 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm8712-201ENSMUST00000221090 701 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf3Q9Z2L7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Crlf3Q9Z2L7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms