Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cldn9Q9Z0S7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cldn9Q9Z0S7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cldn9Q9Z0S7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.93□□□□□ -0.66
Cldn9Q9Z0S7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm15617-201ENSMUST00000118973 771 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm15329-201ENSMUST00000121408 155 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm7741-201ENSMUST00000181445 989 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Mir6927-201ENSMUST00000184494 71 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm37246-201ENSMUST00000192665 835 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cldn9Q9Z0S7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm12217-201ENSMUST00000118858 696 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm15549-201ENSMUST00000121595 622 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm42867-201ENSMUST00000202995 469 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm1821-202ENSMUST00000227415 750 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cldn9Q9Z0S7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms