Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm5764-201ENSMUST00000118817 885 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm23647-201ENSMUST00000175042 109 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Rn5s-201ENSMUST00000177555 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s108-201ENSMUST00000177575 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s121-201ENSMUST00000177589 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s146-201ENSMUST00000177889 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm22109-201ENSMUST00000177995 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm22291-201ENSMUST00000178027 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s141-201ENSMUST00000178066 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm23284-201ENSMUST00000178069 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s100-201ENSMUST00000178106 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s111-201ENSMUST00000178203 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s105-201ENSMUST00000178499 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s149-201ENSMUST00000178520 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s103-201ENSMUST00000178755 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s123-201ENSMUST00000178804 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s142-201ENSMUST00000178820 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s144-201ENSMUST00000178859 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s139-201ENSMUST00000178975 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s134-201ENSMUST00000178983 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s136-201ENSMUST00000179080 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm25018-201ENSMUST00000179081 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s104-201ENSMUST00000179107 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s113-201ENSMUST00000179143 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s133-201ENSMUST00000179275 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s117-201ENSMUST00000179431 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm25212-201ENSMUST00000179432 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s138-201ENSMUST00000179476 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s122-201ENSMUST00000179500 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s143-201ENSMUST00000179542 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s107-201ENSMUST00000179704 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm26391-201ENSMUST00000179843 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s110-201ENSMUST00000179995 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s128-201ENSMUST00000180096 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 n-R5s124-201ENSMUST00000180334 119 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm24089-201ENSMUST00000093696 109 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm26119-201ENSMUST00000175601 104 ntBASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.28□□□□□ -0.28
Scn11aQ9R053 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.28□□□□□ -0.28
Scn11aQ9R053 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn11aQ9R053 Gm15815-201ENSMUST00000120569 255 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm25394-201ENSMUST00000157338 133 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm9372-201ENSMUST00000168454 430 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.27□□□□□ -0.28
Scn11aQ9R053 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn11aQ9R053 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Scn11aQ9R053 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm37723-201ENSMUST00000194480 565 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.27□□□□□ -0.28
Scn11aQ9R053 Gm18010-201ENSMUST00000203553 202 ntBASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms