Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm11246-201ENSMUST00000120880 345 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Upk3aQ9JKX8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm30946-201ENSMUST00000198288 724 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm9463-201ENSMUST00000206707 601 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm45770-201ENSMUST00000212105 616 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk3aQ9JKX8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms