Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Lima1Q9ERG0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm22133-201ENSMUST00000102082 109 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm5616-201ENSMUST00000165252 384 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm8741-201ENSMUST00000174736 384 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lima1Q9ERG0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lima1Q9ERG0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm19287-201ENSMUST00000203190 358 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm43966-201ENSMUST00000203301 612 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm17812-201ENSMUST00000204935 318 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm8913-201ENSMUST00000209491 641 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lima1Q9ERG0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms