Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm4294-201ENSMUST00000105169 614 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm22711-201ENSMUST00000116890 133 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Olfml3-204ENSMUST00000169286 874 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Mir6927-201ENSMUST00000184494 71 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gm1821-202ENSMUST00000227415 750 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Erich3-203ENSMUST00000189969 3460 ntBASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4bQ9D8B3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm23251-201ENSMUST00000103773 110 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm7666-201ENSMUST00000146631 819 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm10774-201ENSMUST00000188689 204 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm18056-201ENSMUST00000207670 568 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm18061-201ENSMUST00000208350 562 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm18063-201ENSMUST00000208529 568 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm18052-201ENSMUST00000208750 559 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms