Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Rgr-203ENSMUST00000225070 4704 ntBASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn22Q9D7U6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm13888-201ENSMUST00000119148 422 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm15881-201ENSMUST00000148792 942 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn22Q9D7U6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cldn22Q9D7U6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm11960-201ENSMUST00000122068 925 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm7666-201ENSMUST00000146631 819 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm44545-201ENSMUST00000208262 746 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm2553-201ENSMUST00000215986 605 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms