Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mir7677-201ENSMUST00000184226 67 ntBASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Mir8093-201ENSMUST00000185043 137 ntBASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm43438-201ENSMUST00000198133 379 ntBASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm270-201ENSMUST00000223010 976 ntBASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm42602-201ENSMUST00000200288 3224 ntBASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chmp4cQ9D7F7 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.58□□□□□ -0.23
Chmp4cQ9D7F7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp4cQ9D7F7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp4cQ9D7F7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp4cQ9D7F7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4cQ9D7F7 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gm11783-201ENSMUST00000119549 885 ntBASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gm18038-201ENSMUST00000197900 485 ntBASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4cQ9D7F7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Gm11663-201ENSMUST00000117888 290 ntBASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Gm15808-201ENSMUST00000119046 604 ntBASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms