Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Mir1247-201ENSMUST00000116706 82 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm25509-201ENSMUST00000116985 106 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm15824-201ENSMUST00000119516 955 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm16107-201ENSMUST00000162523 862 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm5186-201ENSMUST00000218781 920 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm18065-201ENSMUST00000221395 526 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.45□□□□□ -0.58
Trim42Q9D2H5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim42Q9D2H5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gm43433-201ENSMUST00000196573 481 ntBASIC11.44□□□□□ -0.58
Trim42Q9D2H5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Snora73a-201ENSMUST00000082453 205 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms