Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rps4l-202ENSMUST00000204242 789 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gm7046-201ENSMUST00000221351 977 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gm9823-201ENSMUST00000051212 327 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chaf1bQ9D0N7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm23270-201ENSMUST00000104055 131 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm5187-201ENSMUST00000117317 991 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm14071-201ENSMUST00000117817 509 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm11793-201ENSMUST00000120433 981 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm6963-201ENSMUST00000147879 379 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm5745-201ENSMUST00000183748 313 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm3096-201ENSMUST00000185770 364 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chaf1bQ9D0N7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Chaf1bQ9D0N7 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gm11660-201ENSMUST00000120955 412 ntBASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.64□□□□□ -0.71
Chaf1bQ9D0N7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms