Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cldnd1Q9CQX5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm26313-201ENSMUST00000157770 308 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm16547-201ENSMUST00000159474 293 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cldnd1Q9CQX5 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm13286-201ENSMUST00000117750 537 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm8152-201ENSMUST00000120842 637 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm4943-201ENSMUST00000132879 424 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm18733-202ENSMUST00000174447 401 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm29808-201ENSMUST00000194419 468 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cldnd1Q9CQX5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms