Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm11331-201ENSMUST00000119764 288 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm9089-201ENSMUST00000122027 526 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm26461-201ENSMUST00000175064 290 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm43138-201ENSMUST00000199123 708 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm8574-201ENSMUST00000203207 924 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm45856-201ENSMUST00000212752 416 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpa3Q9CQ71 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpa3Q9CQ71 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm11956-201ENSMUST00000119525 512 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm11244-201ENSMUST00000121243 237 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm15549-201ENSMUST00000121595 622 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Mir6979-201ENSMUST00000183927 56 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm37981-201ENSMUST00000194280 535 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms