Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm14058-201ENSMUST00000116082 735 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm15566-201ENSMUST00000121130 590 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm12407-201ENSMUST00000180219 324 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm28450-201ENSMUST00000187349 638 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm9540-201ENSMUST00000188230 478 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Ntng1-201ENSMUST00000051253 327 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim11Q99PQ2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim11Q99PQ2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm14028-201ENSMUST00000117434 479 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm7851-201ENSMUST00000117574 323 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm11450-201ENSMUST00000121144 333 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm9353-201ENSMUST00000200472 604 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm8342-201ENSMUST00000209839 757 ntBASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms