Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Mir8104-201ENSMUST00000185165 101 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm3052-201ENSMUST00000186409 829 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm6517-201ENSMUST00000121056 511 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm3791-201ENSMUST00000220790 768 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Rce1-203ENSMUST00000224707 1255 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gm3527-201ENSMUST00000198905 460 ntBASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh23Q99PF4 Gm14630-201ENSMUST00000118057 246 ntBASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Gm15793-201ENSMUST00000121857 495 ntBASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh23Q99PF4 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm8174-201ENSMUST00000064353 1001 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm14231-201ENSMUST00000120090 592 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms