Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn4Q99P72 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn4Q99P72 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Rtn4Q99P72 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn4Q99P72 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.4■□□□□ 0.06
Rtn4Q99P72 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn4Q99P72 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Tspan6-201ENSMUST00000087557 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm13996-201ENSMUST00000118456 430 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm12566-201ENSMUST00000121479 359 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm24749-201ENSMUST00000157838 343 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm9022-201ENSMUST00000182482 992 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Ighv6-2-201ENSMUST00000192430 295 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm42937-201ENSMUST00000197360 752 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm5885-202ENSMUST00000203357 528 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm19174-201ENSMUST00000216944 956 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm42467-201ENSMUST00000202954 1447 ntBASIC15.39■□□□□ 0.05
Rtn4Q99P72 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtn4Q99P72 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn4Q99P72 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm11858-201ENSMUST00000117935 838 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm7857-201ENSMUST00000117957 358 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm12176-201ENSMUST00000121420 875 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm27025-201ENSMUST00000182392 942 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm19002-201ENSMUST00000192649 1012 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm38330-201ENSMUST00000192743 959 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm9023-201ENSMUST00000198408 1038 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm18012-201ENSMUST00000204558 773 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm17812-201ENSMUST00000204935 318 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 AC154562.1-201ENSMUST00000226140 966 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 AC108945.1-201ENSMUST00000226477 94 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 AC139294.2-201ENSMUST00000227159 285 ntBASIC15.38■□□□□ 0.05
Rtn4Q99P72 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn4Q99P72 Gm17244-201ENSMUST00000192482 3416 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms