Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.05□□□□□ -0.64
Rnf111Q99ML9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Rgr-203ENSMUST00000225070 4704 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm38117-201ENSMUST00000194653 939 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Rps4l-202ENSMUST00000204242 789 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms