Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Mir5132-201ENSMUST00000175166 71 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.77□□□□□ -0.68
Chmp1b1Q99LU0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm26461-201ENSMUST00000175064 290 ntBASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm45575-201ENSMUST00000210283 548 ntBASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chmp1b1Q99LU0 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chmp1b1Q99LU0 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms